Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922127.1_cds_XP_016470917.1_63313
CDS Infomation

[gene=LOC107793145] [db_xref=GeneID:107793145] [protein=peroxisomal membrane protein PEX14-like isoform X2] [protein_id=XP_016470917.1] [location=join(6053..6089,7904..8139,8240..8288,8404..8588,9796..9982,10157..10246,11136..11209,11303..11345,11441..11508,12181..12225,12317..12385,12890..13372)] [gbkey=CDS]
Sequence

ATGGCGTCTCAATCAGACGAGAATAACCAGAATCCAGCTTCACAACCAACAGCTGAAGAT
CATCAAGATTCCAAGCCTGAGACTACAAATGGGAGCTCTCCGACTTCTGTGTTTGTAAAC
TCCGAACCAATTCGGGAGGATCAAGTGCAAAATGCTATGAAGTTTCTTTCACATCCAAAA
GTTAGGGGATCTCCAATCATGTATAGGCGTTCTTTTCTCGAGAGAAAGGGTCTCACGAAG
GAGGAAATAGACGAAGCCTTTCGTCGAGTTCCTGATCCTACCCCAACTGTTACTAGCACA
CAGCCAGTTGCTGCAAATGAAGATGGGAAGCTGAAGCCTTCATCAACTAGTGCACCACAG
GTTGCATTACAAAATATGCAGCCTGCATCAGCTACGCCGAGCAATAGCATGAAAATGGGG
TATCTCTCTCATTTCCATTGGACTCATGCAGTTATTGCTGTAGGTTTACTTGCTGCTTCA
GGAGCTGGAACAGCCGTACTCTTCAAGAAATCCATTATTCCCCGATTGAAGTCATGGATA
CGCAAGGTTGTAATGGATGAAGAAGATGAAAAAGATATTGTAAAGGGAAAACCAAGTTTA
GCGGAAGAAGCTGCTGTTGCTGCGAAAGCTGCTGCAGCCGCTGCTGCTGATGTAGCCCGA
GCAAGCCAGGAGATGTTGGCATCAAAATCCGAAGAGAAAAGGTATTTTGAGGAGCTGACA
AGTCTGTTAAACTACCAAGTACGTGAGATGAAATCAATGGCAAGTGCTATAGAGAAACTG
GAAGGGCAAGGTAATCCTTCTGGAAGAATACCAATTACAGAACTAGATGATCGCAGAATT
TCAGTTACTCAATCTAGGCAATCTTATTTAAATGGAAAAGTAGATGGTGATGCACGTTCA
GTGAGATCCTTGTCACCACCTGCATCTGTGGAACCATCTGTTGCACCCCATCCCAAGTCT
TATATGGAGATTATGGCTATGGTTCAAAGAGGAGAAAAGCCTTCCAACATCCGGGATATA
AATGATCAGCCACCAAATCCTAACCAGCCCGTACCTGATCCTCGTGTTGCTCCAAAGCCT
AAGCCTTGGGAAGTTGGCCAGATTCAAAGTAATTCAACTAATTTGCTTCAATCTCAAGGG
AGTGGCGATGGCTTGAATTACGGTTACCAAGACAATCTGACTAATGGAGACAGTTCAGCA
GCTTGGTGGCAGCGCAGAAATGCCAGGATAACTGAAATCGAAACTGAAGGTGAACAAAAC
TTTGGATCTCCAACTGCAACAGTCCAGGAACGACCAATTCAGAGATCCTGGGTTCCTCCC
CAGCCTCCTCCAGTCGCAATGGCAGAAGCAGCTGCAGCCATTCGCCAACCTAAAAAGCCT
GTGTTTCAGAATGAACAATTGACTGATGATCAGTTGATGGCTCGTTCATCAGAGATAACG
GATGAGTTGCAGAGGGTAACAAGAATCTCCGAATCTGGTGGTGCCCCTGAAGCTAATGGC
TCGAGTTCTGCTCTGCAGATAAGTGAGACACCAATTGGAGAAGGCGATCAACTTTTGAGC
AGCTGA

Peptide Sequence

PEP ID

XP_016470917.1
PEP Infomation

PREDICTED: peroxisomal membrane protein PEX14-like isoform X2 [Nicotiana tabacum]
Sequence

MASQSDENNQNPASQPTAEDHQDSKPETTNGSSPTSVFVNSEPIREDQVQNAMKFLSHPK
VRGSPIMYRRSFLERKGLTKEEIDEAFRRVPDPTPTVTSTQPVAANEDGKLKPSSTSAPQ
VALQNMQPASATPSNSMKMGYLSHFHWTHAVIAVGLLAASGAGTAVLFKKSIIPRLKSWI
RKVVMDEEDEKDIVKGKPSLAEEAAVAAKAAAAAAADVARASQEMLASKSEEKRYFEELT
SLLNYQVREMKSMASAIEKLEGQGNPSGRIPITELDDRRISVTQSRQSYLNGKVDGDARS
VRSLSPPASVEPSVAPHPKSYMEIMAMVQRGEKPSNIRDINDQPPNPNQPVPDPRVAPKP
KPWEVGQIQSNSTNLLQSQGSGDGLNYGYQDNLTNGDSSAAWWQRRNARITEIETEGEQN
FGSPTATVQERPIQRSWVPPQPPPVAMAEAAAAIRQPKKPVFQNEQLTDDQLMARSSEIT
DELQRVTRISESGGAPEANGSSSALQISETPIGEGDQLLSS

Transcript Sequence

Gene sequence data has not been registered.